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Report on DNA Repair Mechanism

Category: Biomedical Engineering Paper Type: Report Writing Reference: CHICAGO Words: 1300

DNA stands for deoxyribonucleic acid. This is the main element of every human body structure. Damage of DNA and replication errors happen in the body's cells, and with the proofreading of DNA and repair mechanism, this is going to be fixed and detected. DNA polymerases are those type of enzymes that are developed in the ceils of DNA. And they check their work during replication. It checks whether any wrong nucleotide is going to be added then it will remove it, and right nucleotide was going to replace.


The enzymes that build the cells in DNA are known as DNA polymerases. During the replication of the DNA, many of the DNA polymerases can keep the check on their function with each added base. This procedure is also known as proofreading. In case the polymerase detects that an incorrect nucleotide has been included, it will eliminate and substitute the nucleotide immediately, before ongoing with the synthesis of DNA.


Different processes that help the real strand to be measured in mismatch repair that include nicks recognition that is identified in new DNA synthesized. Many types of repair mechanisms are used that are help in correcting and detecting any type of damages belong to DNA; these repair processes include double standard break repair, excision repair, and direct reversal. (khanacademy.org 2019)

Maintaining the integrity of DNA

Indication for repair mechanisms and proofreading importance comes from genetic disorders in the human. If the DNA damage does not repair, it will convert to mutation and may cause any disease. During cell division, the process of DNA replication is moved to error, and genetic effects included in the environment. DNA polymerase rate increase wrong nucleotides in replication that measure the mutation rate in every organism consider a major factor. The rate of new dominant mutation found at different loci is considered that help in mutation rate estimation. But with this many other reasons also find mutation rate in different genes. So scientist found that different genes have different mutation rates and having more causes to errors and damages. (S. Clancy 2008)

 In both organisms like eukaryotic and prokaryotic use processes of repair DNA. And with the highly conserved of evolution, the proteins must be involved. Cells are going to produce mush type of mechanism that helps to repair and detect all type of DNA damages without knowing its cause. DNA plays a very critical and active role in the division of cells and cell cycle, and it controls the repair of DNA. The mechanism of check point makes sure that before cell division and DNA replication, DNA is going to be intact.

In both somatic and germline cells, resulting in an accumulation of damage within each, all life forms remain under the constant result. From biological matter to defensible evidence DNA begins its transition, impacts, and changes occur, from the moment a crime is initiated. Faced with the challenges of identifying and securing physical evidence they first face with the appearance of respondents on the screen. The maintenance of the integrity of evidence for laboratory testing and the admissibility of evidence in court, during collection, it became crucial at any time at each touch point to govern how the evidence is handled. (Sancar 2019)

For the collection and preservation of biological samples, reference documents have been prepared for the benefit of field investigators and first responders, for the benefit many regional law enforcement agencies the national institute of justice have these agendas. (S. Clancy 2008)

Chain of custody guidelines and outlined validated industry standards for the identification provided by these documents while they do not provide traceable methods. Preservation and collection of biological samples are provided in this process. The criminal's case most important single aspect is a chain of custody. These are the arguments used against a defense. It has all the things that needed to be mentioned in the aspects of cases to resolve them properly and authentically. There may come many of the problems that can be cured with the involvement of DNA testing in it. DNA integrity refers to the maintenance of DNA tasks from some resources examines and measured accordingly and as well as they are meant to be referred according to the basic needs and wants of the conditions on its survivals properly. (Friedberg 2003)

The repair process of DNA is present in both eukaryotic and prokaryotic organism and depends on the conserved process of proteins. The biological cells evolved number of mechanisms for the detection of damage and repair of damage occurred in the DNA. The damage of DNA can be caused by the environmental effect and the errors of replication. The DNA molecules have vital role in the cell division, repair of DNA and regulation in the cell cycles. The DNA replication occurs in the M Phase, mitosis, and S Phase. In the cell cycle process, the mechanism of checkpoint ensures the intact of DNA cells and permits the DNA replication for the cell division. The failure in the proper functionality of these checkpoints leads to accumulation of changes and results in the mutation of cells. There are number of methods for the repair of DNA damage. The process of direct reversal of DNA damage provides two methods to repair the damage. The UV light induces formation of pyrimidine dimers that are capable to distort the DNA damage in the chain structures. The blocking transcription is restricted in the area of damage. The direct reversal mechanism of photoreactivation causes inversion of dimerization reaction on the use of light energy and reduces the damage in the DNA chain structure. The direct reversal mechanism results in the dimerization of covalent bonds between the bases of adjacent pyrimidine. The alkylating agents can also damage DNA and such kind of damage can be repaired by direct reversal process. the methylation of Guanine bases results in the change of DNA structure as well as formatting of DNA thymine instead of cytosine. In another method protein methyl guanine methyl transferase (MGMT) can be restored by different mechanism of transferring the product in the more active site conditions.

The process of excision is a general mechanism to repair the DNA damage of double helix strands. The damaged DNA is removed rather it can be replaced by the synthesis of new nucleotides. The excision repair can be categorized in three types including mismatch repair, nucleotide excision repair, and base-excision repair. The process is based on the removal of single damage by enzymes and known as glycosylases. The removal of enzymes from the damaged base generates the nucleotide gap in the DNA strands, in the further process the gap is filled by DNA polymerase. The formation of pyrimidine dimmers by UV light is used in the nucleotide excision repair and recognizes damage produced in the endonucleases. In the mismatch process the DNA strands are replicated for the DNA polymerase and restores the original sequences (Stoakes 2019).

References of DNA repair mechanism

Clancy, S. 2008. "DNA damage & repair: Mechanisms for maintaining DNA integrity." 5-45.

Clancy, Suzanne. 2008. DNA Damage & Repair: Mechanisms for Maintaining DNA Integrity. https://www.nature.com/scitable/topicpage/dna-damage-repair-mechanisms-for-maintaining-dna-344.

Friedberg, Errol C. 2003. DNA damage and repair. January 03. https://www.nature.com/articles/nature01408#f1.

J., Lisa CalandroDennis. 2015. Biological Evidence: Maintaining Integrity of DNA Samples through National Standards. April 4. https://www.forensicmag.com/article/2005/04/biological-evidence-maintaining-integrity-dna-samples-through-national-standards.

Jr, Seidel GE. 2015. "Maintaining integrity of germline DNA: individuals age, species do not." 27 (6): 865-871.

Kastan, Michael B. 2010. "Multiple roles of ATM in monitoring and maintaining DNA integrity." 3-15.

khanacademy.org. 2019. DNA proofreading and repair. https://www.khanacademy.org/science/high-school-biology/hs-molecular-genetics/hs-discovery-and-structure-of-dna/a/dna-proofreading-and-repair.

Sancar, Aziz. 2019. Reaction Mechanism of Human DNA Repair Excision Nuclease. http://www.jbc.org/content/271/14/8285.short.

Stoakes, Shelley Farrar. 2019. Mechanisms of DNA Repair. https://www.news-medical.net/life-sciences/Mechanisms-of-DNA-Repair.aspx.

 

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